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Table of Contents

Copyright Information and Preface
Chapter 1: Chromatin Immunoprecipitation
Chapter 2: Towards a faster, more reliable ChIP protocol
Chapter 3: Serial Analysis of Promoter Enrichment
Chapter 4: chromatin immunoprecipitation based determination of transcription factor binding sites: SAPE returns
Chapter 5: Experimental Operon Determination
Chapter 6: Gene and operon boundary determination by barcoded paired-end-tags and highly parallel sequencing
Chapter 7: Removal of rRNA from prokaryotic total RNA samples
Chapter 8: USER cloning
Chapter 9: Dabbling in synthetic biology
Chapter 10: Miscellaneous Experiments
Appendix A: Techniques
Appendix B: Recipes
Appendix C: Protocols
Appendix D: Equipment

Notebook compiled: Feb 12, 2008